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Intron Name: Anas_platyrhynchos_platyrhynchos_3_5787842_5789004_R

Intron Information:

Intron Rank:

134392

Intron Class:

major

Intron Phase:

Intron Coordinates:

5787842 - 5789004

Intron Length:

1163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATGATG

5'SS Class:

major

3'SS Sequence:

TCCTCTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

TGTGAAGGAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

42.5

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

75.8

0.58

0.9

37.6

Minor 5ss

36.1

-1.6

3.3

45.6

43.7

Minor BPS

37.4

-0.9

2.2

50.18

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047830

5787030 - 5789150

2121