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Intron Name: Anas_platyrhynchos_platyrhynchos_3_57925617_57927444_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57925617 - 57927444

Intron Length:

1828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGCG

5'SS Class:

major

3'SS Sequence:

TTTTGCTTCATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTGCTTCATA

Flanking Amino Acid:

RNVRGYNYDEDFEDDDVYGQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

64.1

39.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

81.1

0.7

0.8

76.6

32.2

Minor 5ss

28.1

-2.5

3.6

47.1

Minor BPS

60.5

0.33

2.2

78.78

38.5

Associated Gene:

Gene:

HBS1L

Ensembl Gene ID:

ENSAPLG00000007791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039273

57925574 - 57962015

36442

ENSAPLT00000018922

57925574 - 57934721

9148

ENSAPLT00000008157

57925574 - 57985741

60168

ENSAPLT00000043832

57925574 - 57962269

36696