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Intron Name: Anas_platyrhynchos_platyrhynchos_3_57983190_57984040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57983190 - 57984040

Intron Length:

851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TATTTACCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATGTTTCTAATA

Flanking Amino Acid:

STGEVTKKKPKFLTKGQNAL

Intron Amino Acid Position:

636

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

82.3

0.73

0.8

79.1

34.2

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

55.4

0.16

1.6

65.47

35.4

Associated Gene:

Gene:

HBS1L

Ensembl Gene ID:

ENSAPLG00000007791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008157

57925574 - 57985741

60168