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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58119293_58143720_F

Intron Information:

Intron Rank:

136955

Intron Class:

major

Intron Phase:

Intron Coordinates:

58119293 - 58143720

Intron Length:

24428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCCAAT

U12 Branch Point Sequence:

TCTGTCCAATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

54.1

0.1

1.4

64.7

Major PPT

95.2

1.02

0.5

28.1

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

42.6

-0.4

2.2

63.33

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018011

58094624 - 58144016

49393