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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58381429_58381878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58381429 - 58381878

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTAATAAAA

Flanking Amino Acid:

ELMNANPSPPPSPSQQINLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.3

43.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.6

0.84

0.7

81.3

36.3

Minor 5ss

39.2

-1.2

2.9

49.5

46.5

Minor BPS

49.3

-0

1.9

67.75

37.6

Associated Gene:

Gene:

SGK1

Ensembl Gene ID:

ENSAPLG00000007896

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008278

58379178 - 58385301

6124

ENSAPLT00000045669

58334121 - 58385301

51181

ENSAPLT00000021008

58308968 - 58385301

76334

ENSAPLT00000019214

58380163 - 58385301

5139

ENSAPLT00000018823

58308968 - 58385301

76334