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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58381984_58382441_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58381984 - 58382441

Intron Length:

458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

GTTTTGGGAATT

Flanking Amino Acid:

KVIGKGSFGKVLLARHKAEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.7

33.5

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

83.3

0.75

0.9

80.8

36.8

Minor 5ss

44.1

-0.6

2.8

56.9

47.3

Minor BPS

43.2

-0.4

2.6

68.72

42.7

Associated Gene:

Gene:

SGK1

Ensembl Gene ID:

ENSAPLG00000007896

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021008

58308968 - 58385301

76334

ENSAPLT00000019214

58380163 - 58385301

5139

ENSAPLT00000018823

58308968 - 58385301

76334

ENSAPLT00000008278

58379178 - 58385301

6124

ENSAPLT00000045669

58334121 - 58385301

51181