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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58440340_58442690_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58440340 - 58442690

Intron Length:

2351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TCTTCCTTTATA

Flanking Amino Acid:

LISLTFLTVTELIGLSWVCF

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

73.8

0.59

0.9

26.8

Major PPT

84.9

0.79

0.7

80.2

25.3

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

72.6

0.71

1.6

79.05

37.5

Associated Gene:

Gene:

SLC2A12

Ensembl Gene ID:

ENSAPLG00000007989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008286

58416893 - 58444074

27182