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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58611568_58618428_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58611568 - 58618428

Intron Length:

6861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTTTTTTCAACA

Flanking Amino Acid:

DTHLFFNDLEECDQVHIDDV

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

87.7

0.85

0.8

85.4

27.8

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

72.9

0.71

1.4

31.4

Associated Gene:

Gene:

EYA4

Ensembl Gene ID:

ENSAPLG00000008029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024811

58602745 - 58764342

161598

ENSAPLT00000039277

58602745 - 58764342

161598

ENSAPLT00000008381

58605518 - 58764342

158825

ENSAPLT00000038304

58602745 - 58764342

161598

ENSAPLT00000038257

58541106 - 58764342

223237

ENSAPLT00000029244

58528685 - 58764342

235658

ENSAPLT00000046174

58541106 - 58764342

223237