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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58618519_58637618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58618519 - 58637618

Intron Length:

19100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

CTAACCTTGATT

Flanking Amino Acid:

TGSYAQKYGKDPPMAVTLGL

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

79.5

0.73

0.9

36.9

Major PPT

78.1

0.63

82.6

32.9

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

67.6

0.64

1.3

76.49

40.3

Associated Gene:

Gene:

EYA4

Ensembl Gene ID:

ENSAPLG00000008029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024811

58602745 - 58764342

161598

ENSAPLT00000008381

58605518 - 58764342

158825