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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58633435_58637618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58633435 - 58637618

Intron Length:

4184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCATGACTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TCTATATTAATC

Flanking Amino Acid:

TGSYAQKYGKLCSPFTPSLS

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

72.9

0.52

62.6

43.2

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

58.7

0.25

1.6

67.65

38.1

Associated Gene:

Gene:

EYA4

Ensembl Gene ID:

ENSAPLG00000008029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039277

58602745 - 58764342

161598

ENSAPLT00000038304

58602745 - 58764342

161598

ENSAPLT00000038257

58541106 - 58764342

223237

ENSAPLT00000029244

58528685 - 58764342

235658

ENSAPLT00000046174

58541106 - 58764342

223237