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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58647152_58648123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58647152 - 58648123

Intron Length:

972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATAGTTTTAATT

Flanking Amino Acid:

GQTPYSYQMPGSSFTPSSTI

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.63

0.9

75.5

38.4

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

0.52

1.3

74.15

37.4

Associated Gene:

Gene:

EYA4

Ensembl Gene ID:

ENSAPLG00000008029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029244

58528685 - 58764342

235658

ENSAPLT00000046174

58541106 - 58764342

223237

ENSAPLT00000024811

58602745 - 58764342

161598

ENSAPLT00000039277

58602745 - 58764342

161598

ENSAPLT00000008381

58605518 - 58764342

158825

ENSAPLT00000038304

58602745 - 58764342

161598

ENSAPLT00000038257

58541106 - 58764342

223237