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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58648552_58650503_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58648552 - 58650503

Intron Length:

1952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTTAGTGTC

5'SS Class:

major

3'SS Sequence:

TCCTGATATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTTTCCTGATAT

Flanking Amino Acid:

HQYSPQIYPSKPYPHILSTP

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

74.5

34.2

Major BPS

78.8

0.71

67.6

40.6

Major PPT

68.8

0.42

0.9

66.4

38.9

Minor 5ss

35.3

-1.7

3.2

45.8

36.2

Minor BPS

64.4

0.53

1.8

86.64

38.7

Associated Gene:

Gene:

EYA4

Ensembl Gene ID:

ENSAPLG00000008029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038257

58541106 - 58764342

223237

ENSAPLT00000029244

58528685 - 58764342

235658

ENSAPLT00000046174

58541106 - 58764342

223237

ENSAPLT00000024811

58602745 - 58764342

161598

ENSAPLT00000039277

58602745 - 58764342

161598

ENSAPLT00000008381

58605518 - 58764342

158825

ENSAPLT00000038304

58602745 - 58764342

161598