Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_58657051_58661715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58657051 - 58661715

Intron Length:

4665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGAGAG

5'SS Class:

major

3'SS Sequence:

TTCTTCTATGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

GTCTACTTATTC

Flanking Amino Acid:

LSCSTPSSATMSLLAVKTEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

61.5

37.4

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

80.8

0.69

0.8

77.8

29.9

Minor 5ss

37.6

-1.4

3.3

46.6

43.4

Minor BPS

53.8

0.1

1.8

63.93

41.8

Associated Gene:

Gene:

EYA4

Ensembl Gene ID:

ENSAPLG00000008029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029244

58528685 - 58764342

235658

ENSAPLT00000024811

58602745 - 58764342

161598

ENSAPLT00000046174

58541106 - 58764342

223237

ENSAPLT00000008381

58605518 - 58764342

158825

ENSAPLT00000038304

58602745 - 58764342

161598

ENSAPLT00000038257

58541106 - 58764342

223237