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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58685342_58748601_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58685342 - 58748601

Intron Length:

63260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTTGCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

GTGAGAGTAACT

Flanking Amino Acid:

EDSQDLSEQSVKKTCTESDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.8

35.3

Major BPS

0.57

1.2

77.7

37.1

Major PPT

89.3

0.88

0.7

84.5

30.4

Minor 5ss

38.2

-1.3

2.7

49.5

40.3

Minor BPS

41.6

-0.5

2.5

62.57

46.8

Associated Gene:

Gene:

EYA4

Ensembl Gene ID:

ENSAPLG00000008029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029244

58528685 - 58764342

235658

ENSAPLT00000046174

58541106 - 58764342

223237

ENSAPLT00000024811

58602745 - 58764342

161598

ENSAPLT00000039277

58602745 - 58764342

161598

ENSAPLT00000008381

58605518 - 58764342

158825

ENSAPLT00000038304

58602745 - 58764342

161598

ENSAPLT00000038257

58541106 - 58764342

223237