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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58785646_58785802_F

Intron Information:

Intron Rank:

146149

Intron Class:

major

Intron Phase:

Intron Coordinates:

58785646 - 58785802

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAAGTAT

5'SS Class:

major

3'SS Sequence:

TTCTGTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ACTTCATAGAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

71.8

34.1

Major BPS

78.6

0.71

79.6

32.9

Major PPT

82.7

0.74

0.9

80.2

37.3

Minor 5ss

39.5

-1.2

3.5

43.9

Minor BPS

44.4

-0.5

2.1

50.95

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028726

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042460

58785230 - 58801015

15786