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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58792809_58800500_F

Intron Information:

Intron Rank:

146147

Intron Class:

major

Intron Phase:

Intron Coordinates:

58792809 - 58800500

Intron Length:

7692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

GTTGTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

TTTTCCACATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.9

33.7

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

80.6

0.69

0.9

76.9

42.1

Minor 5ss

27.4

-2.6

2.7

31.6

42.2

Minor BPS

53.3

0.18

2.1

81.42

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028726

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026733

58792385 - 58801015

8631