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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58800563_58800742_F

Intron Information:

Intron Rank:

146148

Intron Class:

major

Intron Phase:

Intron Coordinates:

58800563 - 58800742

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGCTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAC

U12 Branch Point Sequence:

TTTTGCTCAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.8

23.7

Major BPS

65.7

0.39

1.1

67.4

36.7

Major PPT

67.4

0.39

1.1

67.1

38.4

Minor 5ss

35.6

-1.6

2.8

42.6

38.4

Minor BPS

54.4

2.1

69.15

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028726

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042460

58785230 - 58801015

15786

ENSAPLT00000026733

58792385 - 58801015

8631