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Intron Name: Anas_platyrhynchos_platyrhynchos_3_5890170_5892442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5890170 - 5892442

Intron Length:

2273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTCCCTTAATG

Flanking Amino Acid:

SFMVELKTILEIALKNTEEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.6

30.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.5

0.66

0.9

77.4

34.7

Minor 5ss

33.1

-1.9

3.2

40.3

40.2

Minor BPS

75.2

0.65

1.3

72.74

40.2

Associated Gene:

Gene:

FANCL

Ensembl Gene ID:

ENSAPLG00000016346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035527

5885476 - 5911018

25543

ENSAPLT00000017062

5885680 - 5914597

28918