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Intron Name: Anas_platyrhynchos_platyrhynchos_3_58961650_58971687_F

Intron Information:

Intron Rank:

133080

Intron Class:

major

Intron Phase:

Intron Coordinates:

58961650 - 58971687

Intron Length:

10038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTATTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTTAT

U12 Branch Point Sequence:

GTTTATTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

63.5

0.34

1.4

57.4

49.1

Major PPT

81.8

0.72

0.9

37.6

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

57.4

0.23

1.9

72.93

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038474

58961483 - 58972668

11186