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Intron Name: Anas_platyrhynchos_platyrhynchos_3_5898101_5902932_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5898101 - 5902932

Intron Length:

4832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ACATTTTAAAAA

Flanking Amino Acid:

HLITLKLNAKYPTEPPDCLV

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

82.6

24.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.4

0.66

0.8

77.2

31.6

Minor 5ss

37.7

-1.4

47.2

Minor BPS

47.9

-0.1

1.7

54.83

38.1

Associated Gene:

Gene:

FANCL

Ensembl Gene ID:

ENSAPLG00000016346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035527

5885476 - 5911018

25543

ENSAPLT00000017062

5885680 - 5914597

28918