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Intron Name: Anas_platyrhynchos_platyrhynchos_3_59025573_59028843_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

59025573 - 59028843

Intron Length:

3271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCGCT

5'SS Class:

major

3'SS Sequence:

GTCTGTGACTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TTGTCTGTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

69.7

41.3

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

64.6

0.33

61.5

43.7

Minor 5ss

44.5

-0.6

3.3

65.7

45.4

Minor BPS

61.2

0.43

2.1

82.48

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025541

59025421 - 59046972

21552

ENSAPLT00000021752

59025421 - 59038294

12874

ENSAPLT00000009124

59025421 - 59046972

21552