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Intron Name: Anas_platyrhynchos_platyrhynchos_3_5903002_5910793_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5903002 - 5910793

Intron Length:

7792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTCATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTATGTTTAAAT

Flanking Amino Acid:

VQFAISWMPQNSLIDIHNQF

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

75.6

35.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

0.74

0.7

79.4

26.2

Minor 5ss

39.9

-1.1

2.9

44.2

Minor BPS

63.7

0.51

1.8

81.97

39.4

Associated Gene:

Gene:

FANCL

Ensembl Gene ID:

ENSAPLG00000016346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035527

5885476 - 5911018

25543

ENSAPLT00000017062

5885680 - 5914597

28918