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Intron Name: Anas_platyrhynchos_platyrhynchos_3_59033331_59034505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59033331 - 59034505

Intron Length:

1175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTAAT

5'SS Class:

strong_major

3'SS Sequence:

GCATTCTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAA

U12 Branch Point Sequence:

CTATTTTGGACT

Flanking Amino Acid:

NTHNTIMSMTGSGIYAPDGA

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

88.9

24.6

Major BPS

69.4

0.48

1.2

63.4

44.3

Major PPT

68.5

0.42

0.8

66.2

35.6

Minor 5ss

37.5

-1.4

2.8

51.2

45.3

Minor BPS

56.2

0.27

1.5

71.52

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021752

59025421 - 59038294

12874

ENSAPLT00000009124

59025421 - 59046972

21552

ENSAPLT00000025541

59025421 - 59046972

21552