Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_59312319_59312777_F

Intron Information:

Intron Rank:

124263

Intron Class:

major

Intron Phase:

Intron Coordinates:

59312319 - 59312777

Intron Length:

459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATCTGC

5'SS Class:

major

3'SS Sequence:

CCCATATCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACCAA

U12 Branch Point Sequence:

CTGCCCATATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

56.9

43.4

Major BPS

56.4

0.16

1.3

67.1

39.2

Major PPT

71.5

0.48

0.9

61.6

Minor 5ss

43.8

-0.7

2.8

50.7

Minor BPS

49.8

0.06

1.9

70.37

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030491

59312318 - 59313384

1067