About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_59441184_59442039_R

Intron Information:

Intron Rank:
24
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
59441184 - 59442039
Intron Length:
856

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GCA|GTAAGTAGC
5'SS Class:
major
3'SS Sequence:
TCTTTCCCAATAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTACAA
U12 Branch Point Sequence:
TCTTTCCCAATA
Flanking Amino Acid:
HREDNSESCADGKSESLWVE
Intron Amino Acid Position:
973

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
76.3
0.62
1
70.3
40.5
Major BPS
73.5
0.59
1
81.3
29.9
Major PPT
74.3
0.55
0.8
70.8
28.9
Minor 5ss
38.3
-1.3
2.8
51.5
39
Minor BPS
52.2
0.07
1.9
67.7
39.2

Associated Gene:

Gene:
ENPP1
Ensembl Gene ID:
ENSAPLG00000009457
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000021275
59439252 - 59495836
56585
ENSAPLT00000009934
59440674 - 59495836
55163
ENSAPLT00000032697
59439252 - 59495836
56585