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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_59457615_59458689_R

Intron Information:

Intron Rank:
15
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
59457615 - 59458689
Intron Length:
1075

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TAG|GTAAGTTGC
5'SS Class:
strong_major
3'SS Sequence:
TTTTTTTTAATAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TATAAAT
U12 Branch Point Sequence:
TTTTTTTTAATA
Flanking Amino Acid:
FYLNSQWQLARKPFEIKSCM
Intron Amino Acid Position:
623

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
95
1.06
0.7
82.3
32.2
Major BPS
74.5
0.61
1
79.6
29.1
Major PPT
86.6
0.82
0.7
85.3
27.9
Minor 5ss
40.5
-1.1
2.8
53
44.2
Minor BPS
82.2
1.01
0.9
86.33
25.3

Associated Gene:

Gene:
ENPP1
Ensembl Gene ID:
ENSAPLG00000009457
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000021275
59439252 - 59495836
56585
ENSAPLT00000009934
59440674 - 59495836
55163
ENSAPLT00000032697
59439252 - 59495836
56585