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Intron Name: Anas_platyrhynchos_platyrhynchos_3_59468158_59471316_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
59468158 - 59471316

Intron Length:
3159

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGC|GTGAGTAGT

5'SS Class:
major

3'SS Sequence:
TTTTTCCTTCTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGCAAAT

U12 Branch Point Sequence:
TTGTCTGCAAAT

Flanking Amino Acid:
GRLLPVISKLQKCGTFTSSM

Intron Amino Acid Position:
340

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.6
0.39
1.3
68.8
43.8

Major BPS
62.1
0.3
1.2
67.3
37.8

Major PPT
88.6
0.87
0.6
82
30

Minor 5ss
32.9
-1.9
2.8
37.9
40

Minor BPS
48
-0
2.3
73.16
43.8

Associated Gene:

Gene:
ENPP1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59439252 - 59495836
56585

59439252 - 59495836
56585

59440674 - 59495836
55163