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Intron Name: Anas_platyrhynchos_platyrhynchos_3_5947311_5948716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5947311 - 5948716

Intron Length:

1406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TAATCCTTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTGTTTTAATC

Flanking Amino Acid:

ETVLQLGARMLDTLEYIHDN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.4

0.46

0.9

62.5

39.1

Minor 5ss

45.6

-0.5

2.5

56.4

42.4

Minor BPS

64.9

0.45

1.3

68.66

38.1

Associated Gene:

Gene:

VRK2

Ensembl Gene ID:

ENSAPLG00000016420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017140

5918294 - 5953187

34894