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Intron Name: Anas_platyrhynchos_platyrhynchos_3_5949857_5953138_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5949857 - 5953138

Intron Length:

3282

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCA|GCTAGCAAT

5'SS Class:

weak_major

3'SS Sequence:

GCTGCAAAACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CTGAACTGAAAT

Flanking Amino Acid:

CTDSPCTSLPKQIRKWMNLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.1

1.5

57.5

47.3

Major BPS

82.1

0.8

71.6

36.4

Major PPT

46.1

-0.2

1.1

36.6

37.8

Minor 5ss

29.3

-2.4

3.9

47.2

42.2

Minor BPS

47.7

-0.1

1.8

64.25

45.2

Associated Gene:

Gene:

VRK2

Ensembl Gene ID:

ENSAPLG00000016420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017140

5918294 - 5953187

34894