About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_59535158_59536969_R

Intron Information:

Intron Rank:
15
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
59535158 - 59536969
Intron Length:
1812

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTACCATCA
5'SS Class:
major
3'SS Sequence:
GGTTTCTTCTCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTAAT
U12 Branch Point Sequence:
TTTTAATTCACA
Flanking Amino Acid:
LLVDRQWLAVRDNSYTFCDV
Intron Amino Acid Position:
483

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
68.1
0.43
1.2
62.5
39
Major BPS
99.5
1.23
0.5
98.2
4.2
Major PPT
79.7
0.67
0.9
77
37.2
Minor 5ss
42.7
-0.8
3.1
57.7
46.4
Minor BPS
55.2
0.16
2.2
77.78
38.6

Associated Gene:

Gene:
ENPP3
Ensembl Gene ID:
ENSAPLG00000009807
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010304
59519434 - 59561610
42177