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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_59545399_59546634_R

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
59545399 - 59546634
Intron Length:
1236

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CCG|GTAGGTTTA
5'SS Class:
major
3'SS Sequence:
TCTTTATCCATAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTATAT
U12 Branch Point Sequence:
ATATCTTTATCC
Flanking Amino Acid:
FQPEWWKGQPMWLTAMYQGL
Intron Amino Acid Position:
268

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.1
0.69
1
75.4
37.3
Major BPS
79.2
0.73
1
75.3
39.4
Major PPT
77.8
0.63
0.8
73.3
30.5
Minor 5ss
42.9
-0.8
3.1
57.9
46.7
Minor BPS
66.9
0.51
1.5
73.6
37.1

Associated Gene:

Gene:
ENPP3
Ensembl Gene ID:
ENSAPLG00000009807
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010304
59519434 - 59561610
42177