About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_59546755_59547338_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
59546755 - 59547338

Intron Length:
584

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTAAGTGAG

5'SS Class:
major

3'SS Sequence:
TTTCATTTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
TTTGTTTTCATT

Flanking Amino Acid:
TFPNHYTIVTGLYPESHGII

Intron Amino Acid Position:
228

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1
66.4
39.5

Major BPS
100
1.24
0.5
100
0

Major PPT
89.3
0.88
0.7
84.5
30

Minor 5ss
34.2
-1.8
3.2
45.7
43.5

Minor BPS
56.6
0.29
1.8
78.3
39.3

Associated Gene:

Gene:
ENPP3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59519434 - 59561610
42177