Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_59550503_59552896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59550503 - 59552896

Intron Length:

2394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGATAA

5'SS Class:

major

3'SS Sequence:

TATTTTCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

AACTCCTTAATG

Flanking Amino Acid:

TPLETPQCPAGFDVPPLILF

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

64.8

37.9

Major BPS

76.8

0.67

40.9

Major PPT

86.8

0.83

0.7

81.2

30.6

Minor 5ss

35.4

-1.7

3.3

37.9

Minor BPS

72.6

0.57

1.3

66.95

Associated Gene:

Gene:

ENPP3

Ensembl Gene ID:

ENSAPLG00000009807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010304

59519434 - 59561610

42177