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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_59558379_59561496_R

Intron Information:

Intron Rank:
1
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
59558379 - 59561496
Intron Length:
3118

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GCT|GTAAGTAGG
5'SS Class:
major
3'SS Sequence:
ATTTGTGTGACAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTATGAA
U12 Branch Point Sequence:
CAATTATGAACT
Flanking Amino Acid:
TLQKYKIICAFLLVALVVVS
Intron Amino Acid Position:
39

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
73.6
0.56
1.1
66
45.2
Major BPS
75.5
0.63
1
66
40.9
Major PPT
69.8
0.45
1.1
65
45.2
Minor 5ss
38
-1.3
2.8
52.4
44.2
Minor BPS
51.3
0.12
1.7
68.1
42

Associated Gene:

Gene:
ENPP3
Ensembl Gene ID:
ENSAPLG00000009807
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010304
59519434 - 59561610
42177