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Intron Name: Anas_platyrhynchos_platyrhynchos_3_59565868_59566792_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59565868 - 59566792

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGGCCG

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

AGCAGCTTACCT

Flanking Amino Acid:

QLQSIFEEVVKTEVIEEAFP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

55.7

42.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

93.2

0.97

0.6

88.8

20.4

Minor 5ss

25.8

-2.8

27.8

37.2

Minor BPS

47.3

-0.1

2.1

63.63

46.3

Associated Gene:

Gene:

MED23

Ensembl Gene ID:

ENSAPLG00000010330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010807

59565829 - 59601502

35674