Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_59567024_59567748_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59567024 - 59567748

Intron Length:

725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAACATT

5'SS Class:

major

3'SS Sequence:

GCTGTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

CCATAAATACAT

Flanking Amino Acid:

FRQFWSSLSQESHEQCVQWI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.2

76.3

39.1

Major BPS

66.1

0.4

31.5

Major PPT

83.1

0.75

0.9

80.2

37.3

Minor 5ss

-1

58.2

46.1

Minor BPS

36.3

-0.9

49.26

43.2

Associated Gene:

Gene:

MED23

Ensembl Gene ID:

ENSAPLG00000010330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010807

59565829 - 59601502

35674