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Intron Name: Anas_platyrhynchos_platyrhynchos_3_59569616_59570478_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59569616 - 59570478

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAATGACA

5'SS Class:

major

3'SS Sequence:

TTTTCTCACCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

CTTTTCTCACCC

Flanking Amino Acid:

LYPEGKLPHWLLGNLVSDFV

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

65.1

40.5

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

80.7

0.69

0.8

74.1

35.6

Minor 5ss

32.2

-2

32.9

41.8

Minor BPS

55.9

0.16

1.9

69.77

Associated Gene:

Gene:

MED23

Ensembl Gene ID:

ENSAPLG00000010330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010807

59565829 - 59601502

35674