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Intron Name: Anas_platyrhynchos_platyrhynchos_3_59570549_59572240_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59570549 - 59572240

Intron Length:

1692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TCATTGCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TGTTGTAGAATT

Flanking Amino Acid:

RPTARINSICGRCSLLPVVN

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

0.4

62.8

38.5

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

46.8

-0.1

2.1

70.4

40.8

Associated Gene:

Gene:

MED23

Ensembl Gene ID:

ENSAPLG00000010330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010807

59565829 - 59601502

35674