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Intron Name: Anas_platyrhynchos_platyrhynchos_3_59588925_59589366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59588925 - 59589366

Intron Length:

442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGTT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCTACTTTTATT

Flanking Amino Acid:

TLSCFPAPLQVFFKQNNVPQ

Intron Amino Acid Position:

760

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

78.8

35.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

84.4

0.77

0.8

81.9

33.7

Minor 5ss

35.2

-1.7

3.8

55.5

48.6

Minor BPS

60.5

0.41

1.6

76.16

40.9

Associated Gene:

Gene:

MED23

Ensembl Gene ID:

ENSAPLG00000010330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010807

59565829 - 59601502

35674