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Intron Name: Anas_platyrhynchos_platyrhynchos_3_59589803_59591046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59589803 - 59591046

Intron Length:

1244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

GGTTCTAAAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

AGGTTCTAAAGC

Flanking Amino Acid:

FFFLYTLVHPDSDINSNSTF

Intron Amino Acid Position:

842

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

0.9

67.8

37.5

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

61.8

0.27

1.1

56.8

42.4

Minor 5ss

29.9

-2.3

3.3

35.1

42.4

Minor BPS

-0.1

1.9

56.54

42.3

Associated Gene:

Gene:

MED23

Ensembl Gene ID:

ENSAPLG00000010330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010807

59565829 - 59601502

35674