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Intron Name: Anas_platyrhynchos_platyrhynchos_3_59756562_59835487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59756562 - 59835487

Intron Length:

78926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGTCT

5'SS Class:

major

3'SS Sequence:

TTTTTAATCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCTTTTTAATC

Flanking Amino Acid:

MKVSVLERQIFD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

65.9

40.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.1

0.74

0.8

77.8

34.2

Minor 5ss

-1.3

3.6

56.7

47.6

Minor BPS

0.57

1.2

69.9

36.2

Associated Gene:

Gene:

NKAIN2

Ensembl Gene ID:

ENSAPLG00000003618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003691

59756494 - 60154191

397698