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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60322658_60329040_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60322658 - 60329040

Intron Length:

6383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAAGGA

5'SS Class:

major

3'SS Sequence:

GCATCCACCAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TGTGCATCCACC

Flanking Amino Acid:

TAISKKFGDMRSHSISYSIR

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

59.6

39.7

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

51.1

0.03

49.1

32.9

Minor 5ss

28.1

-2.5

3.5

38.8

46.3

Minor BPS

44.6

-0.4

2.3

60.67

44.1

Associated Gene:

Gene:

TPD52L1

Ensembl Gene ID:

ENSAPLG00000003348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027331

60285393 - 60338928

53536

ENSAPLT00000025370

60304832 - 60338928

34097