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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60343233_60343625_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60343233 - 60343625

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGACAC

5'SS Class:

major

3'SS Sequence:

TGTTCCTATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTGTTCCTATTT

Flanking Amino Acid:

RLQDFYDSTAVFHKLVKYNL

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

60.4

38.4

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

76.1

0.59

0.9

74.6

35.3

Minor 5ss

38.5

-1.3

47.7

42.5

Minor BPS

53.4

0.18

1.9

75.86

41.4

Associated Gene:

Gene:

HDDC2

Ensembl Gene ID:

ENSAPLG00000003198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003257

60343173 - 60351803

8631