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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60351525_60351740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60351525 - 60351740

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCCGGGC

5'SS Class:

major

3'SS Sequence:

TCTCCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

CTCTGAGTGACC

Flanking Amino Acid:

AFLRLLGQLKRVPRTGWVYR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.4

0.25

1.2

50.6

40.5

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

75.5

0.57

0.7

69.5

24.3

Minor 5ss

28.6

-2.5

3.7

41.2

45.5

Minor BPS

40.7

-0.7

2.5

54.19

44.4

Associated Gene:

Gene:

HDDC2

Ensembl Gene ID:

ENSAPLG00000003198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037695

60325634 - 60351803

26170

ENSAPLT00000003257

60343173 - 60351803

8631