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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60479532_60484103_R

Intron Information:

Intron Rank:

129739

Intron Class:

major

Intron Phase:

Intron Coordinates:

60479532 - 60484103

Intron Length:

4572

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TTTCTCCCACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.8

73.6

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

78.1

0.63

0.8

71.5

34.3

Minor 5ss

23.2

-3.1

3.6

31.4

42.8

Minor BPS

45.9

-0.3

2.1

65.62

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031905

60478447 - 60484285

5839