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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60505437_60511363_R

Intron Information:

Intron Rank:

154644

Intron Class:

major

Intron Phase:

Intron Coordinates:

60505437 - 60511363

Intron Length:

5927

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGCAA

U12 Branch Point Sequence:

TAAGCAAAAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.4

1.17

0.7

94.5

Major BPS

48.5

-0

1.4

38.9

Major PPT

83.7

0.76

0.7

76.7

Minor 5ss

-2.9

41.3

45.2

Minor BPS

-1

2.2

46.49

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027504

60503987 - 60516298

12312

ENSAPLT00000024525

60503458 - 60511976

8519

ENSAPLT00000019656

60498332 - 60511976

13645