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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60511420_60516157_R

Intron Information:

Intron Rank:

154652

Intron Class:

major

Intron Phase:

Intron Coordinates:

60511420 - 60516157

Intron Length:

4738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGTGACT

5'SS Class:

major

3'SS Sequence:

CTGTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ATGGCTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.9

0.28

1.2

59.8

44.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

84.5

0.78

0.8

37.3

Minor 5ss

33.1

-1.9

3.4

40.9

45.2

Minor BPS

68.8

0.67

1.3

77.6

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027504

60503987 - 60516298

12312