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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60589009_60607302_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60589009 - 60607302

Intron Length:

18294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTATATGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATAT

Flanking Amino Acid:

KKERRQGYFARLKKKRQAKQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

76.1

35.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.2

0.54

69.1

40.9

Minor 5ss

40.8

-1

3.4

56.2

Minor BPS

58.9

0.36

1.7

76.11

Associated Gene:

Gene:

NCOA7

Ensembl Gene ID:

ENSAPLG00000002790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002869

60588877 - 60654986

66110