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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60626164_60626904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60626164 - 60626904

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCGAG

5'SS Class:

major

3'SS Sequence:

TTTTCCTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

AAACCAATGACA

Flanking Amino Acid:

PPPSPPPPAADDNQNKTNEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.2

43.4

Major BPS

60.3

0.26

65.5

Major PPT

86.8

0.83

0.6

85.9

Minor 5ss

34.3

-1.8

3.6

45.4

49.7

Minor BPS

45.5

-0.3

1.8

54.81

36.3

Associated Gene:

Gene:

NCOA7

Ensembl Gene ID:

ENSAPLG00000002790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025921

60626085 - 60654986

28902