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Intron Name: Anas_platyrhynchos_platyrhynchos_3_60626985_60627848_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60626985 - 60627848

Intron Length:

864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

AATTTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAAACTTTAAAT

Flanking Amino Acid:

QKPLGTVEYTAGNQDTINSI

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

84.6

0.78

0.8

82.1

34.7

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

65.7

0.57

1.4

76.56

39.2

Associated Gene:

Gene:

NCOA7

Ensembl Gene ID:

ENSAPLG00000002790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025921

60626085 - 60654986

28902

ENSAPLT00000002869

60588877 - 60654986

66110